tf.contrib.distributions.VectorDiffeomixture

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VectorDiffeomixture distribution.

Inherits From: Distribution

tf.contrib.distributions.VectorDiffeomixture(
    mix_loc, temperature, distribution, loc=None, scale=None, quadrature_size=8, qua
    drature_fn=tf.contrib.distributions.quadrature_scheme_softmaxnormal_quantiles,
    validate_args=False, allow_nan_stats=True, name='VectorDiffeomixture'
)

A vector diffeomixture (VDM) is a distribution parameterized by a convex combination of K component loc vectors, loc[k], k = 0,...,K-1, and K scale matrices scale[k], k = 0,..., K-1. It approximates the following compound distribution

p(x) = int p(x | z) p(z) dz,
where z is in the K-simplex, and
p(x | z) := p(x | loc=sum_k z[k] loc[k], scale=sum_k z[k] scale[k])

The integral int p(x | z) p(z) dz is approximated with a quadrature scheme adapted to the mixture density p(z). The N quadrature points z_{N, n} and weights w_{N, n} (which are non-negative and sum to 1) are chosen such that

as N --> infinity.

Since q_N(x) is in fact a mixture (of N points), we may sample from q_N exactly. It is important to note that the VDM is defined as q_N above, and not p(x). Therefore, sampling and pdf may be implemented as exact (up to floating point error) methods.

A common choice for the conditional p(x | z) is a multivariate Normal.

The implemented marginal p(z) is the SoftmaxNormal, which is a K-1 dimensional Normal transformed by a SoftmaxCentered bijector, making it a density on the K-simplex. That is,

Z = SoftmaxCentered(X),
X = Normal(mix_loc / temperature, 1 / temperature)

The default quadrature scheme chooses z_{N, n} as N midpoints of the quantiles of p(z) (generalized quantiles if K > 2).

See [Dillon and Langmore (2018)][1] for more details.

About Vector distributions in TensorFlow.

The VectorDiffeomixture is a non-standard distribution that has properties particularly useful in variational Bayesian methods.

Conditioned on a draw from the SoftmaxNormal, X|z is a vector whose components are linear combinations of affine transformations, thus is itself an affine transformation.

About Diffeomixtures and reparameterization.

The VectorDiffeomixture is designed to be reparameterized, i.e., its parameters are only used to transform samples from a distribution which has no trainable parameters. This property is important because backprop stops at sources of stochasticity. That is, as long as the parameters are used after the underlying source of stochasticity, the computed gradient is accurate.

Reparametrization means that we can use gradient-descent (via backprop) to optimize Monte-Carlo objectives. Such objectives are a finite-sample approximation of an expectation and arise throughout scientific computing.

Examples

import tensorflow_probability as tfp
tfd = tfp.distributions

# Create two batches of VectorDiffeomixtures, one with mix_loc=[0.],
# another with mix_loc=[1]. In both cases, `K=2` and the affine
# transformations involve:
# k=0: loc=zeros(dims)  scale=LinearOperatorScaledIdentity
# k=1: loc=[2.]*dims    scale=LinOpDiag
dims = 5
vdm = tfd.VectorDiffeomixture(
    mix_loc=[[0.], [1]],
    temperature=[1.],
    distribution=tfd.Normal(loc=0., scale=1.),
    loc=[
        None,  # Equivalent to `np.zeros(dims, dtype=np.float32)`.
        np.float32([2.]*dims),
    ],
    scale=[
        tf.linalg.LinearOperatorScaledIdentity(
          num_rows=dims,
          multiplier=np.float32(1.1),
          is_positive_definite=True),
        tf.linalg.LinearOperatorDiag(
          diag=np.linspace(2.5, 3.5, dims, dtype=np.float32),
          is_positive_definite=True),
    ],
    validate_args=True)

References

[1]: Joshua Dillon and Ian Langmore. Quadrature Compound: An approximating family of distributions. arXiv preprint arXiv:1801.03080, 2018. https://arxiv.org/abs/1801.03080

Methods

batch_shape_tensor

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batch_shape_tensor(
    name='batch_shape_tensor'
)

Shape of a single sample from a single event index as a 1-D Tensor.

The batch dimensions are indexes into independent, non-identical parameterizations of this distribution.

cdf

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cdf(
    value, name='cdf'
)

Cumulative distribution function.

Given random variable X, the cumulative distribution function cdf is:

cdf(x) := P[X <= x]

copy

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copy(
    **override_parameters_kwargs
)

Creates a deep copy of the distribution.

covariance

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covariance(
    name='covariance'
)

Covariance.

Covariance is (possibly) defined only for non-scalar-event distributions.

For example, for a length-k, vector-valued distribution, it is calculated as,

Cov[i, j] = Covariance(X_i, X_j) = E[(X_i - E[X_i]) (X_j - E[X_j])]

where Cov is a (batch of) k x k matrix, 0 <= (i, j) < k, and E denotes expectation.

Alternatively, for non-vector, multivariate distributions (e.g., matrix-valued, Wishart), Covariance shall return a (batch of) matrices under some vectorization of the events, i.e.,

Cov[i, j] = Covariance(Vec(X)_i, Vec(X)_j) = [as above]

where Cov is a (batch of) k' x k' matrices, 0 <= (i, j) < k' = reduce_prod(event_shape), and Vec is some function mapping indices of this distribution's event dimensions to indices of a length-k' vector.

cross_entropy

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cross_entropy(
    other, name='cross_entropy'
)

Computes the (Shannon) cross entropy.

Denote this distribution (self) by P and the other distribution by Q. Assuming P, Q are absolutely continuous with respect to one another and permit densities p(x) dr(x) and q(x) dr(x), (Shanon) cross entropy is defined as:

H[P, Q] = E_p[-log q(X)] = -int_F p(x) log q(x) dr(x)

where F denotes the support of the random variable X ~ P.

entropy

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entropy(
    name='entropy'
)

Shannon entropy in nats.

event_shape_tensor

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event_shape_tensor(
    name='event_shape_tensor'
)

Shape of a single sample from a single batch as a 1-D int32 Tensor.

is_scalar_batch

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is_scalar_batch(
    name='is_scalar_batch'
)

Indicates that batch_shape == [].

is_scalar_event

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is_scalar_event(
    name='is_scalar_event'
)

Indicates that event_shape == [].

kl_divergence

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kl_divergence(
    other, name='kl_divergence'
)

Computes the Kullback--Leibler divergence.

Denote this distribution (self) by p and the other distribution by q. Assuming p, q are absolutely continuous with respect to reference measure r, the KL divergence is defined as:

KL[p, q] = E_p[log(p(X)/q(X))]
         = -int_F p(x) log q(x) dr(x) + int_F p(x) log p(x) dr(x)
         = H[p, q] - H[p]

where F denotes the support of the random variable X ~ p, H[., .] denotes (Shanon) cross entropy, and H[.] denotes (Shanon) entropy.

log_cdf

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log_cdf(
    value, name='log_cdf'
)

Log cumulative distribution function.

Given random variable X, the cumulative distribution function cdf is:

log_cdf(x) := Log[ P[X <= x] ]

Often, a numerical approximation can be used for log_cdf(x) that yields a more accurate answer than simply taking the logarithm of the cdf when x << -1.

log_prob

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log_prob(
    value, name='log_prob'
)

Log probability density/mass function.

log_survival_function

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log_survival_function(
    value, name='log_survival_function'
)

Log survival function.

Given random variable X, the survival function is defined:

log_survival_function(x) = Log[ P[X > x] ]
                         = Log[ 1 - P[X <= x] ]
                         = Log[ 1 - cdf(x) ]

Typically, different numerical approximations can be used for the log survival function, which are more accurate than 1 - cdf(x) when x >> 1.

mean

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mean(
    name='mean'
)

Mean.

mode

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mode(
    name='mode'
)

Mode.

param_shapes

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@classmethod
param_shapes(
    sample_shape, name='DistributionParamShapes'
)

Shapes of parameters given the desired shape of a call to sample().

This is a class method that describes what key/value arguments are required to instantiate the given Distribution so that a particular shape is returned for that instance's call to sample().

Subclasses should override class method _param_shapes.

param_static_shapes

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@classmethod
param_static_shapes(
    sample_shape
)

param_shapes with static (i.e. TensorShape) shapes.

This is a class method that describes what key/value arguments are required to instantiate the given Distribution so that a particular shape is returned for that instance's call to sample(). Assumes that the sample's shape is known statically.

Subclasses should override class method _param_shapes to return constant-valued tensors when constant values are fed.

prob

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prob(
    value, name='prob'
)

Probability density/mass function.

quantile

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quantile(
    value, name='quantile'
)

Quantile function. Aka "inverse cdf" or "percent point function".

Given random variable X and p in [0, 1], the quantile is:

quantile(p) := x such that P[X <= x] == p

sample

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sample(
    sample_shape=(), seed=None, name='sample'
)

Generate samples of the specified shape.

Note that a call to sample() without arguments will generate a single sample.

stddev

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stddev(
    name='stddev'
)

Standard deviation.

Standard deviation is defined as,

stddev = E[(X - E[X])**2]**0.5

where X is the random variable associated with this distribution, E denotes expectation, and stddev.shape = batch_shape + event_shape.

survival_function

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survival_function(
    value, name='survival_function'
)

Survival function.

Given random variable X, the survival function is defined:

survival_function(x) = P[X > x]
                     = 1 - P[X <= x]
                     = 1 - cdf(x).

variance

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variance(
    name='variance'
)

Variance.

Variance is defined as,

Var = E[(X - E[X])**2]

where X is the random variable associated with this distribution, E denotes expectation, and Var.shape = batch_shape + event_shape.